Browse of TCMCG016C13885 protein

CDS

Accession Number	TCMCG016C13885
gbkey	CDS
Protein Id	OMO77828.1
Location	join(31147..31194,31297..31525,31667..31779,31994..32086,32404..32567,32666..32902,33006..33150,33255..33433,33523..33668,33758..33876,34341..34514,34734..34895,34980..35180,35259..35393,35483..35686,35769..35913,36167..36273,36438..36575,37343..37394,37660..37827,38029..38312)
Organism	Corchorus capsularis
locus_tag	CCACVL1_14789

Protein

Length	1080aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source	AWWV01010688.1
Definition	Armadillo-like helical [Corchorus capsularis]
Locus_tag	CCACVL1_14789

EGGNOG-MAPPER Annotation

COG_category	D
Description	sister-chromatid cohesion protein
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K06671        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04110        [VIEW IN KEGG] ko04111        [VIEW IN KEGG] ko04113        [VIEW IN KEGG] map04110        [VIEW IN KEGG] map04111        [VIEW IN KEGG] map04113        [VIEW IN KEGG]
GOs	GO:0000003        [VIEW IN EMBL-EBI] GO:0000280        [VIEW IN EMBL-EBI] GO:0000819        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005694        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007049        [VIEW IN EMBL-EBI] GO:0007059        [VIEW IN EMBL-EBI] GO:0007062        [VIEW IN EMBL-EBI] GO:0007127        [VIEW IN EMBL-EBI] GO:0007135        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008608        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0022402        [VIEW IN EMBL-EBI] GO:0022414        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045132        [VIEW IN EMBL-EBI] GO:0045143        [VIEW IN EMBL-EBI] GO:0045144        [VIEW IN EMBL-EBI] GO:0048285        [VIEW IN EMBL-EBI] GO:0051177        [VIEW IN EMBL-EBI] GO:0051276        [VIEW IN EMBL-EBI] GO:0051316        [VIEW IN EMBL-EBI] GO:0051321        [VIEW IN EMBL-EBI] GO:0051455        [VIEW IN EMBL-EBI] GO:0051754        [VIEW IN EMBL-EBI] GO:0061982        [VIEW IN EMBL-EBI] GO:0061983        [VIEW IN EMBL-EBI] GO:0070192        [VIEW IN EMBL-EBI] GO:0070601        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0098813        [VIEW IN EMBL-EBI] GO:0140013        [VIEW IN EMBL-EBI] GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGACGACGACGCGCCTCTAGCTTCCGAGATTGCCGCTCGTCGCTCGAGAAGGACTAGGGTTCAAATTCGAGGCGGTGGAGATGAGCCTAGCAAGGAAAATGGTAACAGTGGGGAGAATCAAGAAAGGAGCAGCGATGCTAGTGATGGTAGCCCCAATCCGGAGGAGCGGGAGGGTTCACCTGATGATTTTGAAGAAATTCGTCCCAAAGCTAAGCGGAATCGAGTTGCTGAGGAAGCTTCTGATGCCCCAAACATACCTAACGAGAGATTAATTGAGGTAATTAAAGGTGATGGCAAACGTATTCCTCAAGTTGTCAAGCGGTGGGTTGAGCGGTATGAAAAGGATCCAAAACCTGCAATGGTTGAACTCTTGATGATGCTTTTTGAGGCATGCGGAGCAAAGTATTATATCAAGGAGGAGTTTCTGGATGAGACTGGTGTTGATGCAGTTGTTGTAGCTCTTGTCAACCTCGCCCGAAATGGGGAAGTTGAAGATTACCAAAGCTCTAAGCGGAAGGAGTTTAAAAATTTCAAAGAGAACCTTTGTTCATTTTTGGACAATTTGGTTATTGAGTGCCAGAATGGACCATTGTTTGATAAGGATTTATTTGACAAATTCCTGGACTATATAATTGCATTGTCATGCACTCCTCCAAGAGTATATAGGCAAGTTGCTTCATTGATGGGTCTCCAACTTGTCACATCTTTCATCTCTGTTGCAAAAAGGCTTGCTGCACAGCGTGACACTACTCAGAGACAGTTAAATGCTGAAAGGAAGAAAAGAGTTGATGGACCTCGTGTAGAGTCACTAAATAACAGGTTATCAGCAACTCATGAACAGACACTTGAGATGGATGAGATGATGCGTAAAATCTTCACTGGGTTGTTTGTGCATCGATACCGAGACATTGATCCTAATATTCGGATGTCATGCATACAGTCACTGGGTGTTTGGATTTTGTCATATCCTACGTTGTTTTTAGCGGATCTATACTTAAAGTATCTTGGATGGACATTAAATGACAAAAGTGCTGGTGTTAGAAAAGCTGCTGTCCTTGCATTGCAAAATCTTTATGAAGCTGAGGACAACGTGCCGACGCTTAATTTATTTACTGAAAGATTTTCTAGCCGGATGATTGAGCTTGCTGATGATATTGATGTTTCTGTGGCTGTCTGTGCTATAGGGCTTGTAAAACAATTACTTAGGCATCAGCTTATACCTGATGACGACTTGGGTTCTTTGTATGATCTACTTATTGATGATCCACCAGAGATCAGGCGTGCCATAGGAGAATTAGTATATGATCACTTAATTGCTCAAAAATTTAACAGTTCCCAATCTGGCTCAAAAGGCAATGGCAGTGAGGTCCATCTTGGCAGAATGTTGCAGATATTACGGGAGTTTTCAACAGATCCCATTTTAAGTATATATGTTATTGATGATGTGTGGGAGTACATGAAGGCAATGAAGGATTGGAAGTGTATTATCTCCATGCTTTTGGATGAGAATCCATTAATTGAGCTAACTGATGAAGATGCAACAAACCTTTCTAGGCTTCTTTTTGCTTCTGTTAGGAAGGCTGTTGGAGAGAGAATTGTCCCTGCTTCTGATAATCGCAAGCAATATTACAACAAAGCTCAAAGGGAAATATTTGAAAACAACCGGAAGGATGTTACTGTTGCCATGATGAAGAACTACCCATTACTTCTACGTAAATTCATGGCTGATAAGGCAAAAATTCCATCATTGGTTGAGATTATTGTGTACATGAACCTTGAGCTTTATTCTTTGAAGAGACAGGAGCAAAATTTCAAAACTGTTCTTCAGCTCATCAAAGATGCATTTTTCAAACATGGTGAGAAAGATGCATTGAGATCTTGTGTTAAGGCTATTAATTTTTGTTGCACTGAAAGTCGAGGAGAGCTGCAAGATTTTGCTCGTAACAAACTGAAGGAACTTGAAGATGAGCTCATTGATAAGCTTAAATCAGCAATTGAAGAAGTGACGGATGGTGGGGATGAATATTCTCTTCTTGTAAATTTAAAAAGGTTGTATGAGCTTCAATTGTCAAGGCCTGTACAAATTGAAACCTATGGAAATAGTATCACAATCTTGCATAGCTTTAGAAACTCAGAAGAAGAAGTTGTTGGTTTTCTGCTGCTCAATATGTACTTGGATGTAGCATGGTCTTTGCACTCTATTATAAATAGCGAAACTGTCTCTGAAGGATCCCTGTCCTCCCTCCTGTCTAAACGTGATACCTTGTTGGAGGAACTTGAGTACTTTCTTAATGCCCCTTGTGAAGTTGAGGAAGGGGGAAAATTTGGAAATCAACTAGCCTGCAGGGTTTGTACTATACTAGCTGATGTTTGGAGCCTGTTTAGGAAGGCTAATTTTTTGTCAACAAAGCTTGAACGGTTAGGGTATTCTCCAGATGGCCCAATTCTTCAAAAGTTTTGGAGGCTTTGTGAGCAACAGTTAAATACTTCAGATGAGACGGAAGATGAAGATGCTAACAAAGAGTATATCGAGGAGACTAATAGAGATGCTGTCATGATTGCTGCTGCAAAATTGATTGCTAACGGTACAGTTCCAAAGGACTATCTTGCTCCAGAGATAATTTCCCATTTTGTTATGCATGGAGCTGGCATCACAGAGATTGTAAAGGGTTTGATCACGGTTCTGAAGAAAAAAGATGAAGATATCTCCGTAATCTTTCTAGAAGCATTGAAAAGGGCCTATAATCGACATGTAGAATTCTCGAAAGGTGATGATGAATCCTTAAAAAGATTTAACCTTTTAGCATCACTTTATATTTTATTATTTTGTAGTCTGAAGGATGTCCAGAAGTGGACTGAAAATGTAGATACGGATGAGGATCCAAGTGGATGGCGCCCCTATAACAAATTTTATGATATTTTACAAGAGAAGTGTGCAAAGAACGAAGGGGTTCAAGATGAGAAGGAAGGGACTGCAGCAAAACGTAGGGGTCGTCCTCGGAAGCGGCGAAATATCGAGGGGAAGAGACTTTTTGATGAACACAGTTCAAGTGAAGAAGAGGATTCAATCAGCGTGTCGGACCAAGAAGATGCTCAAGGTGAGGGAGACAAGGAAGATGAGGAGGAAGAAGATGATGCTCCTTTAATTCATGCACTTAAGTCCTCTAAGTTAAGGTCATTACGAGTTGCAAGAGAAGAAAACAGAGGCCAGTCGAGGGCTGGAGCTTCTGGAAGAAGTTAG

Protein:   MDDDAPLASEIAARRSRRTRVQIRGGGDEPSKENGNSGENQERSSDASDGSPNPEEREGSPDDFEEIRPKAKRNRVAEEASDAPNIPNERLIEVIKGDGKRIPQVVKRWVERYEKDPKPAMVELLMMLFEACGAKYYIKEEFLDETGVDAVVVALVNLARNGEVEDYQSSKRKEFKNFKENLCSFLDNLVIECQNGPLFDKDLFDKFLDYIIALSCTPPRVYRQVASLMGLQLVTSFISVAKRLAAQRDTTQRQLNAERKKRVDGPRVESLNNRLSATHEQTLEMDEMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYPTLFLADLYLKYLGWTLNDKSAGVRKAAVLALQNLYEAEDNVPTLNLFTERFSSRMIELADDIDVSVAVCAIGLVKQLLRHQLIPDDDLGSLYDLLIDDPPEIRRAIGELVYDHLIAQKFNSSQSGSKGNGSEVHLGRMLQILREFSTDPILSIYVIDDVWEYMKAMKDWKCIISMLLDENPLIELTDEDATNLSRLLFASVRKAVGERIVPASDNRKQYYNKAQREIFENNRKDVTVAMMKNYPLLLRKFMADKAKIPSLVEIIVYMNLELYSLKRQEQNFKTVLQLIKDAFFKHGEKDALRSCVKAINFCCTESRGELQDFARNKLKELEDELIDKLKSAIEEVTDGGDEYSLLVNLKRLYELQLSRPVQIETYGNSITILHSFRNSEEEVVGFLLLNMYLDVAWSLHSIINSETVSEGSLSSLLSKRDTLLEELEYFLNAPCEVEEGGKFGNQLACRVCTILADVWSLFRKANFLSTKLERLGYSPDGPILQKFWRLCEQQLNTSDETEDEDANKEYIEETNRDAVMIAAAKLIANGTVPKDYLAPEIISHFVMHGAGITEIVKGLITVLKKKDEDISVIFLEALKRAYNRHVEFSKGDDESLKRFNLLASLYILLFCSLKDVQKWTENVDTDEDPSGWRPYNKFYDILQEKCAKNEGVQDEKEGTAAKRRGRPRKRRNIEGKRLFDEHSSSEEEDSISVSDQEDAQGEGDKEDEEEEDDAPLIHALKSSKLRSLRVAREENRGQSRAGASGRS